PRKDC Gene

Last updated on: 29.05.2022

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Definition
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The PRKDC gene (PRKDC stands for "Protein Kinase, DNA-Activated, Catalytic Subunit") is a protein-coding gene located on chromosome 8q11.21. The gene encodes "DNA-PKcs" a subunit of a serine/threonine protein kinase that belongs to the PI3/PI4 kinase family. The second component of this protein kinase is the autoimmune antigen Ku. On its own, DNA-PKcs is inactive. It relies on Ku to reach the DNA ends to trigger there and its kinase activity. Serine/threonine protein kinase acts as a molecular sensor for DNA damage. In order to develop its catalytic properties, the protein must be bound to DNA.

Serine/threonine protein kinase can phosphorylate C1D not only in the presence of linear DNA but also in the presence of supercoiled DNA. The ability to phosphorylate p53/TP53 in the presence of supercoiled DNA is dependent on C1D.

Serine/threonine protein kinase plays a role in regulating the DNA virus-mediated innate immune response by assembling into the HDP-RNP complex, a complex that serves as a platform for IRF3 phosphorylation and subsequent activation of the innate immune response via the cGAS-STING pathway.

Clinical picture
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Diseases associated with PRKDC include "immunodeficiency 26 with or without neurological abnormalities" (van der Burg M et al 2009).

Literature
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  1. Araki R et al (1997) Nonsense mutation at tyr-4046 in the DNA-dependent protein kinase catalytic subunit of severe combined immune deficiency mice. Proc Nat Acad Sci 94: 2438-2443.
  2. Chen S et al (2021) Structural basis of long-range to short-range synaptic transition in NHEJ. Nature 593:294-298)
  3. Dietlein F et al (2014). Molecular pathways: exploiting tumor-specific molecular defects in DNA repair pathways for precision cancer therapy. Clin Cancer Res 20: 5882-5887.
  4. Harper JW et al (2007) The DNA damage response: ten years after. Mol Cell 28: 739-745.
  5. Kastan MB (2008): DNA damage responses: mechanisms and roles in human disease: 2007 G.H.A. Clowes Memorial Award Lecture. Mol Cancer Res 6: 517-524.
  6. Ma Y et. al. (2002) Hairpin opening and overhang processing by an Artemis/DNA-dependent protein kinase complex in nonhomologous end joining and V(D)J recombination. Cell108:781-94).
  7. van der Burg M et al (2009) DNA-PKcs mutation in a radiosensitive T-B- SCID patient inhibits Artemis activation and nonhomologous end-joining. J Clin Invest 119: 91-98.
  8. van der Burg M et al (2009) DNA-PKcs deficiency in human: long predicted, finally found. Curr Opin Allergy Clin Immunol 9:503-509.

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Last updated on: 29.05.2022