The NOD2 gene (NOD2 stands for: Nucleotide-binding oligomerization domain-containing protein 2), also known as the NLRC2 gene or CARD15 gene, is a protein-coding gene located on chromosome 16p12-q21. The NOD2 gene codes for the protein receptor of the same name NOD2, a cytoplasmic recognition receptor (PPR). Together with other PPRs, NOD2 organizes natural and acquired immunity via the recognition of bacterial components of microbial (highly conserved) polypeptide glycans, which form the basic scaffold of the bacterial cell wall (Caruso R et al. 2014).
NOD2 belongs to the family of NOD-like receptors (NLR). These are cytoplasmic (non-membrane-bound) protein receptors that primarily recognize bacterial lipopolysaccharides and peptidoglycans. Like toll-like receptors, NOD-like receptors belong to the large group of pathogen recognition receptors (PPR). These are similar in structure to the PPRs of plants (in plants these proteins are used to defend against predators). They are often the starting point for allergic reactions in humans). NOD-like receptors represent an important component of innate immunity.
Biochemically, NOD-like receptors (NLR) are characterized by a three-part domain structure:
The NOD domain (nucleotide binding oligomerization domain - NOD) is located centrally, C-terminally there are leucine-rich sequences (leucine-rich repeats - LRR). The effector domains CARD, pyrin or BIR are bound N-terminally. PAMPs (also known as MAMPs-microbial/pathogen associated molecular pattern) are recognized and bound via the leucine-rich docking sites. The N-terminal domain defines which signaling pathways are induced downstream when the receptors are activated.
NOD-like receptors activate an inflammatory response via the expression of antimicrobial peptides (AMPs). Furthermore, NOD-like receptors induce apoptosis via mechanisms that are not yet clearly understood.
In principle, the NLRs can be divided into 2 main groups with regard to their functionality: the NLRC group with the two main representatives NOD1 and NOD2 and the inflammasome-activating NLRs with their main representatives, the NLRPs.